FAM90A1

Across TCGA patient cohorts, FAM90A1 mutation is significantly associated with the RNA expression of many other genes, with 2,818 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM90A1-associated genes across cancer lineages are NOL12, LINC02340, and TUBGCP5. Each is linked with FAM90A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM90A1-to-partner and partner-to-FAM90A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NOL12 grouped by FAM90A1-low versus FAM90A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM90A1→partner) and Y-score (partner→FAM90A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	NOL12 →	+0.343	+3.839	<.001	<.001	3	2
UCEC	LINC02340 →	+0.370	+2.607	<.001	<.001	3	2
UCEC	TUBGCP5 →	+0.395	+2.633	.001	<.001	3	2
LUAD	MBD3L1 →	+0.093	+4.445	<.001	.002	3	2
LUAD	MIR3925 →	+0.288	+4.303	.004	.009	3	2
UCEC	RHBDD3 →	+0.374	+1.807	.005	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,818 associations by consensus.

NOL12 by FAM90A1 expression — UCEC

Explore this box plot interactively →