FAM86EP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM86EP mutation is significantly associated with the RNA expression of many other genes, with 1,960 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM86EP-associated genes across cancer lineages are RN7SL454P, RNA5SP410, and CA15P2. Each is linked with FAM86EP in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM86EP-to-partner and partner-to-FAM86EP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL454P grouped by FAM86EP-low versus FAM86EP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM86EP→partner) and Y-score (partner→FAM86EP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL454P →+0.153+1.975<.001<.00132
UCECRNA5SP410 →+0.498+1.499<.001.00932
SKCMCA15P2 →+0.035+4.147<.001.00832
BRCALINC02342 →+0.078+7.731.002.00931
CESCLINC00686 →+0.698+4.996<.001.00231
CESCRN7SL62P →+0.112+4.812<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,960 associations by consensus.

RN7SL454P by FAM86EP expression — UCEC

Box plot of RN7SL454P in FAM86EP-low vs FAM86EP-high samples in UCEC.

Explore this box plot interactively →

Exploration