FAM83C

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM83C RNA expression is significantly associated with the protein abundance of many other proteins, with 9,804 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM83C-associated proteins across cancer lineages are KRT17_S13, SFN, and SLC38A2. Each is linked with FAM83C in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM83C-to-partner and partner-to-FAM83C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM83C versus KRT17_S13 in LSCC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM83C→partner) and Y-score (partner→FAM83C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCKRT17_S13 →+2.236+1.987<.001<.00133
HNSCSFN →+1.033+1.801<.001<.00133
HNSCSLC38A2 →+0.678+1.629<.001<.00133
BRCAMAP4K2_S328 →-0.424-0.053.001.00133
LSCCMAPKBP1_S18 →+0.587+1.318<.001<.00133
LSCCARHGAP18 →-0.282-1.595<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,804 associations by consensus.

FAM83C vs KRT17_S13 — LSCC

Per-sample scatter of FAM83C vs KRT17_S13 in LSCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration