FAM83B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM83B protein abundance is significantly associated with the RNA expression of many other genes, with 13,997 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM83B-associated genes across cancer lineages are RGS22, AFF3, and KCNK1. Each is linked with FAM83B in more than 4 cancer types. Because this analysis shows association rather than direction, both FAM83B-to-partner and partner-to-FAM83B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM83B versus RGS22 in BRCA, with a Pearson correlation of -0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM83B→partner) and Y-score (partner→FAM83B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARGS22 →-1.020-0.712<.001<.00135
BRCAAFF3 →-1.857-0.803<.001<.00135
BRCAKCNK1 →+1.199+0.510.001.00734
BRCACFAP91 →-0.738-0.681<.001<.00134
HNSCANGPTL5 →-0.436-0.513<.001<.00134
LSCCGJB5 →+1.569+0.688<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,997 associations by consensus.

FAM83B vs RGS22 — BRCA

Per-sample scatter of FAM83B vs RGS22 in BRCA (Pearson r = -0.41).

Explore this scatter interactively →

Exploration