FAM83B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM83B mutation is significantly associated with the RNA expression of many other genes, with 5,747 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM83B-associated genes across cancer lineages are LEO1, C18orf54, and NIPA1. Each is linked with FAM83B in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM83B-to-partner and partner-to-FAM83B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LEO1 grouped by FAM83B-low versus FAM83B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM83B→partner) and Y-score (partner→FAM83B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLEO1 →+0.385+1.488<.001<.00133
UCECC18orf54 →+0.413+1.209<.001.00333
UCECNIPA1 →+0.803+2.125<.001<.00133
UCECFANCB →+0.268+1.536.003.00133
UCECRPL23AP82 →+0.424+1.632<.001<.00133
SKCMKRT5 →-1.155-1.452.004<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,747 associations by consensus.

LEO1 by FAM83B expression — UCEC

Box plot of LEO1 in FAM83B-low vs FAM83B-high samples in UCEC.

Explore this box plot interactively →

Exploration