FAM83A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM83A protein abundance is significantly associated with the RNA expression of many other genes, with 9,677 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible FAM83A-associated genes across cancer lineages are RASL11A, COLGALT2, and FAM83A-AS1. Each is linked with FAM83A in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM83A-to-partner and partner-to-FAM83A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM83A versus RASL11A in LSCC, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM83A→partner) and Y-score (partner→FAM83A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRASL11A →-0.940-1.123.001<.00134
PDACCOLGALT2 →-1.186-1.099<.001<.00134
LSCCFAM83A-AS1 →+1.976+1.572<.001<.00134
HNSCCOCH →-1.487-1.592<.001<.00133
HNSCPLCB4 →-1.405-1.122<.001<.00133
LSCCPPM1H →-0.972-0.996.002.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,677 associations by consensus.

FAM83A vs RASL11A — LSCC

Per-sample scatter of FAM83A vs RASL11A in LSCC (Pearson r = -0.38).

Explore this scatter interactively →

Exploration