FAM71D

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM71D mutation is significantly associated with the RNA expression of many other genes, with 2,626 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM71D-associated genes across cancer lineages are MTND2P25, RN7SL654P, and RNU6ATAC14P. Each is linked with FAM71D in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM71D-to-partner and partner-to-FAM71D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTND2P25 grouped by FAM71D-low versus FAM71D-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71D→partner) and Y-score (partner→FAM71D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMTND2P25 →+0.099+7.954<.001.00833
UCECRN7SL654P →+0.076+2.261.004.00433
SKCMRNU6ATAC14P →+0.407+2.502<.001<.00132
SKCMBCL2L2-PABPN1 →+0.383+2.144<.001.00932
UCECHNRNPA1P71 →+0.154+1.883<.001<.00132
HNSCLINC02379 →+0.189+7.954<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,626 associations by consensus.

MTND2P25 by FAM71D expression — HNSC

Box plot of MTND2P25 in FAM71D-low vs FAM71D-high samples in HNSC.

Explore this box plot interactively →

Exploration