FAM71D

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM71D mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM71D-associated genes across cancer lineages are eEF2, NDRG1_pT346, and TFRC. Each is linked with FAM71D in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM71D-to-partner and partner-to-FAM71D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by FAM71D-low versus FAM71D-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71D→partner) and Y-score (partner→FAM71D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMeEF2 →+0.447+2.700.002.00632
SKCMNDRG1_pT346 →-0.828-3.169.004.01832
SKCMTFRC →+0.492+1.874.048.04932
UCECGATA6 →-0.114-1.655.037.01132
UCECKu80 →+0.278+2.916<.001<.00132
UCECAnnexin-1 →+0.551+2.827.002.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

eEF2 by FAM71D expression — SKCM

Box plot of eEF2 in FAM71D-low vs FAM71D-high samples in SKCM.

Explore this box plot interactively →

Exploration