FAM71C

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM71C RNA expression is significantly associated with the go_rna of many other GO terms, with 353 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible FAM71C-associated GO terms across cancer lineages are Inositol metabolic process, Negative regulation of hydrolase activity, and Positive regulation of synapse assembly. Each is linked with FAM71C in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM71C-to-partner and partner-to-FAM71C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Inositol metabolic process grouped by FAM71C-low versus FAM71C-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM71C→partner) and Y-score (partner→FAM71C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSInositol metabolic process →+0.079+0.010.005.00724
SOFT_TISSUENegative regulation of hydrolase activity →-0.075-0.025<.001.00133
SOFT_TISSUEPositive regulation of synapse assembly →-0.054-0.021<.001.00533
SOFT_TISSUELeukocyte cell-cell adhesion →-0.133-0.018<.001.00133
LIVERRetina vasculature morphogenesis in camera-type eye →-0.314-0.050.003.00533
OVARYRetinal blood vessel morphogenesis →-0.432-0.006<.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 353 associations by consensus.

Inositol metabolic process by FAM71C expression — CNS

Box plot of Inositol metabolic process in FAM71C-low vs FAM71C-high samples in CNS.

Explore this box plot interactively →

Exploration