Across TCGA patient cohorts, FAM47C RNA expression is significantly associated with the go_rna of many other GO terms, with 6,689 significant associations in total. STAD shows the largest number of these associations.

The most reproducible FAM47C-associated GO terms across cancer lineages are Negative regulation of mRNA processing, Negative regulation of RNA splicing, and Proton transmembrane transport. Each is linked with FAM47C in more than 13 cancer types. Because this analysis shows association rather than direction, both FAM47C-to-partner and partner-to-FAM47C results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM47C→partner) and Y-score (partner→FAM47C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of mRNA processing →	+0.066	+0.068	<.001	<.001	3	14
STAD	Negative regulation of RNA splicing →	+0.068	+0.054	<.001	<.001	3	12
STAD	Proton transmembrane transport →	+0.053	+0.065	<.001	<.001	3	12
STAD	Glycerophospholipid metabolic process →	+0.039	+0.052	<.001	<.001	3	12
STAD	Regulation of protein folding →	+0.059	+0.055	<.001	<.001	3	12
STAD	Regulation of DNA repair →	+0.058	+0.063	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,689 associations by consensus.

Exploration

FAM47C survival (RNA) · tumor vs normal (RNA) · all FAM47C data types