FAM43A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM43A protein abundance is significantly associated with the RNA expression of many other genes, with 1,998 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible FAM43A-associated genes across cancer lineages are CENPI, CEP55, and UTP4. Each is linked with FAM43A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM43A-to-partner and partner-to-FAM43A results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM43A→partner) and Y-score (partner→FAM43A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCENPI →-1.221-0.481<.001<.00132
UCECCEP55 →-0.756-0.419.006.00132
OVUTP4 →-0.813-1.006<.001<.00132
CCRCCCAVIN2 →+0.973+0.425.008.00532
UCECCLEC14A →+0.838+0.458<.001<.00132
CCRCCMIR618 →+1.225+0.516.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,998 associations by consensus.

Exploration