FAM43A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM43A mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. COAD shows the largest number of these associations.

The most reproducible FAM43A-associated genes across cancer lineages are INPP4B, JNK_pT183_Y185, and PRDX1. Each is linked with FAM43A in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM43A-to-partner and partner-to-FAM43A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM43A→partner) and Y-score (partner→FAM43A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADINPP4B →-0.396-3.000.031.03531
COADJNK_pT183_Y185 →-0.376-3.169.003.01831
COADPRDX1 →+0.162+3.195.030.01031
COADCaspase-7-cleavedD198 →+1.020+3.178.008.01031
COAD4E-BP1 →+0.350+3.178.001.01013
COADTFRC →+0.846+3.195.001.01021
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

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