FAM3D-AS1

Across TCGA patient cohorts, FAM3D-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,712 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FAM3D-AS1-associated proteins across cancer lineages are EPB41L1, FAM3D, and PPP1R18. Each is linked with FAM3D-AS1 in more than 4 cancer types. Because this analysis shows association rather than direction, both FAM3D-AS1-to-partner and partner-to-FAM3D-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM3D-AS1 versus EPB41L1 in HNSC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM3D-AS1→partner) and Y-score (partner→FAM3D-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	EPB41L1 →	+0.900	+0.549	<.001	<.001	3	5
PDAC	FAM3D →	+1.232	+0.462	<.001	<.001	3	4
GBM	PPP1R18 →	-0.322	-0.364	.002	<.001	3	4
GBM	NDRG2 →	+0.606	+0.361	<.001	<.001	3	4
CCRCC	ARFIP1_S39 →	+0.827	+0.412	<.001	.003	3	3
GBM	PCYT2 →	+0.325	+0.291	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,712 associations by consensus.

FAM3D-AS1 vs EPB41L1 — HNSC

Explore this scatter interactively →