FAM30B

Across TCGA patient cohorts, FAM30B RNA expression is significantly associated with the go_rna of many other GO terms, with 3,231 significant associations in total. STAD shows the largest number of these associations.

The most reproducible FAM30B-associated GO terms across cancer lineages are Synaptic vesicle cytoskeletal transport, Vesicle-mediated transport in synapse, and Regulation of double-strand break repair. Each is linked with FAM30B in more than 4 cancer types. Because this analysis shows association rather than direction, both FAM30B-to-partner and partner-to-FAM30B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Synaptic vesicle cytoskeletal transport grouped by FAM30B-low versus FAM30B-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM30B→partner) and Y-score (partner→FAM30B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Synaptic vesicle cytoskeletal transport →	+0.057	+0.023	<.001	.001	3	5
STAD	Vesicle-mediated transport in synapse →	+0.047	+0.030	<.001	.003	3	4
STAD	Regulation of double-strand break repair →	+0.078	+0.024	<.001	.001	3	4
STAD	Regulation of germinal center formation →	+0.075	+0.034	<.001	.003	3	3
STAD	Negative regulation of gene expression, epigenetic →	+0.082	+0.030	<.001	.003	3	3
STAD	RNA polymerase II preinitiation complex assembly →	+0.084	+0.039	<.001	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,231 associations by consensus.

Synaptic vesicle cytoskeletal transport by FAM30B expression — STAD

Explore this box plot interactively →