FAM230E

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM230E mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM230E-associated genes across cancer lineages are RNA5SP482, RNU6-358P, and YPEL5P3. Each is linked with FAM230E in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM230E-to-partner and partner-to-FAM230E results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP482 grouped by FAM230E-low versus FAM230E-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM230E→partner) and Y-score (partner→FAM230E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP482 →+0.682+5.081.001.00831
UCECRNU6-358P →+1.037+5.133<.001.00831
UCECYPEL5P3 →+0.306+5.420<.001.00531
UCECATP6V1G1P1 →+0.247+6.226<.001.00131
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

RNA5SP482 by FAM230E expression — UCEC

Box plot of RNA5SP482 in FAM230E-low vs FAM230E-high samples in UCEC.

Explore this box plot interactively →

Exploration