FAM220CP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM220CP mutation is significantly associated with the RNA expression of many other genes, with 507 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM220CP-associated genes across cancer lineages are NMBR-AS1, LRRC20, and RAET1K. Each is linked with FAM220CP in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM220CP-to-partner and partner-to-FAM220CP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM220CP→partner) and Y-score (partner→FAM220CP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCNMBR-AS1 →+0.159+5.093.003.00833
UCECLRRC20 →+0.753+3.332.009.00532
UCECRAET1K →+0.445+3.354.008.00532
LUADMRPS18BP2 →+0.052+4.554<.001.00932
SKCMMIR133B →+0.455+4.408<.001.00532
SKCMRNU6-1316P →+0.249+3.328.002.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 507 associations by consensus.

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