FAM219B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM219B mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FAM219B-associated genes across cancer lineages are MIR6853, DEFB108E, and MIR548AD. Each is linked with FAM219B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM219B-to-partner and partner-to-FAM219B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6853 grouped by FAM219B-low versus FAM219B-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM219B→partner) and Y-score (partner→FAM219B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR6853 →+0.364+9.057<.001.00331
BRCADEFB108E →+0.108+8.055<.001.00731
BRCAMIR548AD →+0.338+8.471<.001.00531
BLCAKRTAP12-6P →+0.189+7.640<.001.00931
BRCARNU7-82P →+0.415+7.731<.001.00931
BRCARNA5SP446 →+0.286+8.471<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

MIR6853 by FAM219B expression — BRCA

Box plot of MIR6853 in FAM219B-low vs FAM219B-high samples in BRCA.

Explore this box plot interactively →

Exploration