FAM218A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM218A mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. CNS shows the largest number of these associations.

The most reproducible FAM218A-associated genes across cancer lineages are CDX4 and CLEC6A. Each is linked with FAM218A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM218A-to-partner and partner-to-FAM218A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CDX4 grouped by FAM218A-low versus FAM218A-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM218A→partner) and Y-score (partner→FAM218A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSCDX4 →+0.013+6.357<.001<.00131
CNSCLEC6A →+0.012+5.321.003.00531
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

CDX4 by FAM218A expression — CNS

Box plot of CDX4 in FAM218A-low vs FAM218A-high samples in CNS.

Explore this box plot interactively →

Exploration