FAM204CP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM204CP RNA expression is significantly associated with the protein abundance of many other proteins, with 15,936 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible FAM204CP-associated proteins across cancer lineages are SOX4, SPIN1_S199, and RGS14_S203. Each is linked with FAM204CP in more than 4 cancer types. Because this analysis shows association rather than direction, both FAM204CP-to-partner and partner-to-FAM204CP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM204CP versus SOX4 in HNSC, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM204CP→partner) and Y-score (partner→FAM204CP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSOX4 →+1.545+1.219.001.00135
LSCCSPIN1_S199 →+0.675+1.196<.001<.00135
LSCCRGS14_S203 →-0.556-0.661<.001<.00134
LSCCSPIN1 →+0.348+0.636<.001<.00134
PDACPRAM1_S484 →-0.670-0.519<.001.00234
PDACFOXK1_S213 →+0.425+0.532.005.00834
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,936 associations by consensus.

FAM204CP vs SOX4 — HNSC

Per-sample scatter of FAM204CP vs SOX4 in HNSC (Pearson r = 0.52).

Explore this scatter interactively →

Exploration