FAM199X

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM199X RNA expression is significantly associated with the protein abundance of many other proteins, with 14,327 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM199X-associated proteins across cancer lineages are HUWE1, CUL4B, and DDX41. Each is linked with FAM199X in more than 6 cancer types. Because this analysis shows association rather than direction, both FAM199X-to-partner and partner-to-FAM199X results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM199X versus HUWE1 in COAD, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM199X→partner) and Y-score (partner→FAM199X) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADHUWE1 →+0.267+0.380<.001<.00137
LUADCUL4B →+0.248+0.476<.001<.00135
LSCCDDX41 →+0.304+0.489<.001<.00135
PDACPSMD10 →+0.324+0.422<.001<.00135
LSCCHTATSF1 →+0.404+0.526<.001<.00135
PDACACTR2_T117 →-0.375-0.251.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,327 associations by consensus.

FAM199X vs HUWE1 — COAD

Per-sample scatter of FAM199X vs HUWE1 in COAD (Pearson r = 0.41).

Explore this scatter interactively →

Exploration