FAM199X

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM199X mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM199X-associated genes across cancer lineages are EGFR_pY1068, EGFR_pY1173, and eIF4E. Each is linked with FAM199X in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM199X-to-partner and partner-to-FAM199X results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by FAM199X-low versus FAM199X-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM199X→partner) and Y-score (partner→FAM199X) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.223-2.115.042.01931
UCECEGFR_pY1173 →-0.096-2.301.006.03431
UCECeIF4E →+0.254+3.013.005.01831
UCECAnnexin-1 →+0.660+2.807.004.00331
UCECSmad3 →-0.164-2.999.012.03531
UCECTuberin_pT1462 →+0.258+2.115.010.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

EGFR_pY1068 by FAM199X expression — UCEC

Box plot of EGFR_pY1068 in FAM199X-low vs FAM199X-high samples in UCEC.

Explore this box plot interactively →

Exploration