FAM198B-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, FAM198B-AS1 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of FAM198B-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where FAM198B-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types FAM198B-AS1 is over-expressed in tumor, although a few such as UCEC and BRCA show the opposite, repressed pattern.

KIRC, UCEC, and HNSC are the cancer types where FAM198B-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FAM198B-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllAll+0.290<.0017view →
UCECAllAll−1.393<.0016view →
HNSCAllIII,IV+0.374.0086view →
LUADAllAll+0.338.0016view →
KICHAllAll+0.970.0015view →
BRCAFemaleAll−0.420.0044view →
PRADAllAll+1.034<.0012view →
STADMaleAll+0.532.0262view →
LUSCMaleII,III,IV−0.321.0102view →
CHOLAllAll+0.287.0022view →
LIHCAllAll+0.077.0262view →
KIRPAllAll−0.136.0161view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

FAM198B-AS1–KIRC

Tumor-vs-normal expression box plot for FAM198B-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration