FAM193B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM193B RNA expression is significantly associated with the go_rna of many other GO terms, with 7,168 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible FAM193B-associated GO terms across cancer lineages are Positive regulation of DNA repair, Obsolete histone methylation, and Negative regulation of DNA-templated transcription, elongation. Each is linked with FAM193B in more than 31 cancer types. Because this analysis shows association rather than direction, both FAM193B-to-partner and partner-to-FAM193B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by FAM193B-low versus FAM193B-high in SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM193B→partner) and Y-score (partner→FAM193B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCPositive regulation of DNA repair →+0.065+0.736<.001<.001332
SCLCObsolete histone methylation →+0.127+0.637<.001<.001331
SCLCNegative regulation of DNA-templated transcription, elongation →+0.104+0.725<.001<.001331
SCLCPositive regulation of double-strand break repair via homologous recombination →+0.103+0.759<.001<.001331
STADOrganelle transport along microtubule →+0.056+0.655<.001<.001330
SCLCPositive regulation of double-strand break repair →+0.083+0.660<.001<.001330
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,168 associations by consensus.

Positive regulation of DNA repair by FAM193B expression — SCLC

Box plot of Positive regulation of DNA repair in FAM193B-low vs FAM193B-high samples in SCLC.

Explore this box plot interactively →

Exploration