FAM184B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM184B mutation is significantly associated with the RNA expression of many other genes, with 714 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FAM184B-associated genes across cancer lineages are MSGN1, C9orf92, and KRTAP2-4. Each is linked with FAM184B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM184B-to-partner and partner-to-FAM184B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSGN1 grouped by FAM184B-low versus FAM184B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM184B→partner) and Y-score (partner→FAM184B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEMSGN1 →+0.044+2.345.004.00732
PANCREASC9orf92 →+0.197+5.000<.001.00631
SOFT_TISSUEKRTAP2-4 →+0.122+4.930<.001.00831
LUNG_NSCLC_LUADCSH1 →+0.046+4.343<.001.00231
LUNG_NSCLC_LUADASZ1 →+0.667+4.157<.001.00331
LUNG_NSCLC_LUADKCNK18 →+0.011+4.078<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 714 associations by consensus.

MSGN1 by FAM184B expression — LARGE_INTESTINE

Box plot of MSGN1 in FAM184B-low vs FAM184B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration