FAM163A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM163A mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FAM163A-associated genes across cancer lineages are ITGAD, CFHR2, and ACSM6. Each is linked with FAM163A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM163A-to-partner and partner-to-FAM163A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ITGAD grouped by FAM163A-low versus FAM163A-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM163A→partner) and Y-score (partner→FAM163A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEITGAD →+0.015+4.095<.001.00931
LARGE_INTESTINECFHR2 →+0.057+5.022<.001.00231
LARGE_INTESTINEACSM6 →+0.032+4.169<.001.00711
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

ITGAD by FAM163A expression — LARGE_INTESTINE

Box plot of ITGAD in FAM163A-low vs FAM163A-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration