FAM136A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM136A mutation is significantly associated with the RNA expression of many other genes, with 145 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM136A-associated genes across cancer lineages are TRAJ25, RNU6-618P, and RNA5SP205. Each is linked with FAM136A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM136A-to-partner and partner-to-FAM136A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRAJ25 grouped by FAM136A-low versus FAM136A-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM136A→partner) and Y-score (partner→FAM136A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTRAJ25 →+0.556+5.003<.001.00432
UCECRNU6-618P →+0.585+4.121<.001<.00132
UCECRNA5SP205 →+0.508+4.115<.001.00132
UCECRNU6-1228P →+0.253+4.464<.001.00532
UCECRNVU1-2A →+0.953+3.162<.001.00431
UCECDNTT →+0.424+3.005<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 145 associations by consensus.

TRAJ25 by FAM136A expression — COAD

Box plot of TRAJ25 in FAM136A-low vs FAM136A-high samples in COAD.

Explore this box plot interactively →

Exploration