FAM133A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM133A mutation is significantly associated with the RNA expression of many other genes, with 4,519 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM133A-associated genes across cancer lineages are RPL5P21, BUB3, and RNASEH1. Each is linked with FAM133A in more than 2 cancer types. Because this analysis shows association rather than direction, both FAM133A-to-partner and partner-to-FAM133A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL5P21 grouped by FAM133A-low versus FAM133A-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM133A→partner) and Y-score (partner→FAM133A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRPL5P21 →+0.058+4.505<.001.00933
UCECBUB3 →+0.585+2.169<.001<.00133
UCECRNASEH1 →+0.421+2.828.001.00133
COADRNU1-52P →+0.247+4.239<.001.00533
SKCMZNF101P1 →+0.029+3.065<.001.00132
CESCHMGN1P31 →+0.070+3.590<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,519 associations by consensus.

RPL5P21 by FAM133A expression — HNSC

Box plot of RPL5P21 in FAM133A-low vs FAM133A-high samples in HNSC.

Explore this box plot interactively →

Exploration