FAM111A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM111A protein abundance is significantly associated with the RNA expression of many other genes, with 5,179 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FAM111A-associated genes across cancer lineages are FAM111B, SKA1, and FAM111A-DT. Each is linked with FAM111A in more than 5 cancer types. Because this analysis shows association rather than direction, both FAM111A-to-partner and partner-to-FAM111A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM111A versus FAM111B in UCEC, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM111A→partner) and Y-score (partner→FAM111A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFAM111B →+0.971+0.341.001.00136
BRCASKA1 →+0.938+0.328.001<.00135
LSCCFAM111A-DT →+0.450+0.245<.001<.00135
LUADGINS1 →+0.842+0.263.001<.00134
BRCAE2F1 →+0.869+0.322<.001<.00134
LUADSUV39H1 →+0.559+0.286<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,179 associations by consensus.

FAM111A vs FAM111B — UCEC

Per-sample scatter of FAM111A vs FAM111B in UCEC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration