FAM106A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM106A mutation is significantly associated with the RNA expression of many other genes, with 1,679 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM106A-associated genes across cancer lineages are SERF1AP1, COX15, and FADS1. Each is linked with FAM106A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM106A-to-partner and partner-to-FAM106A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SERF1AP1 grouped by FAM106A-low versus FAM106A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM106A→partner) and Y-score (partner→FAM106A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSERF1AP1 →+0.149+2.694<.001.00432
UCECCOX15 →+0.536+3.708<.001<.00131
UCECFADS1 →+0.921+2.502<.001.00231
UCECEI24 →+0.509+2.502.001.00231
UCECCHEK1 →+0.751+2.721<.001.00331
UCECDLAT →+0.759+2.939<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,679 associations by consensus.

SERF1AP1 by FAM106A expression — UCEC

Box plot of SERF1AP1 in FAM106A-low vs FAM106A-high samples in UCEC.

Explore this box plot interactively →

Exploration