F12

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, F12 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,777 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible F12-associated proteins across cancer lineages are DDX21_S89, HK2, and MECP2. Each is linked with F12 in more than 4 cancer types. Because this analysis shows association rather than direction, both F12-to-partner and partner-to-F12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, F12 versus DDX21_S89 in LSCC, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (F12→partner) and Y-score (partner→F12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDDX21_S89 →+0.671+0.677<.001<.00135
PDACHK2 →+0.526+0.519.001<.00135
LSCCMECP2 →-0.398-0.922<.001<.00135
HNSCMETTL7A →-0.624-0.650.002.00135
LSCCMYC_S62 →+0.632+0.757<.001<.00134
LUADNCBP3_S415 →+0.525+1.018.003<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,777 associations by consensus.

F12 vs DDX21_S89 — LSCC

Per-sample scatter of F12 vs DDX21_S89 in LSCC (Pearson r = 0.48).

Explore this scatter interactively →

Exploration