EXOSC7

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EXOSC7 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EXOSC7-associated genes across cancer lineages are PDCD4, PREX1, and ATM. Each is linked with EXOSC7 in more than 1 cancer types. Because this analysis shows association rather than direction, both EXOSC7-to-partner and partner-to-EXOSC7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PDCD4 grouped by EXOSC7-low versus EXOSC7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EXOSC7→partner) and Y-score (partner→EXOSC7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPDCD4 →-0.537-1.990.003.03032
UCECPREX1 →-0.250-2.459.020.01832
UCECATM →-0.589-3.308<.001.00932
UCECBRD4 →+0.258+2.584.014.01032
SKCMSmac →+0.356+2.824.030.03631
UCEC14-3-3_beta →-0.087-3.295.027.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

PDCD4 by EXOSC7 expression — UCEC

Box plot of PDCD4 in EXOSC7-low vs EXOSC7-high samples in UCEC.

Explore this box plot interactively →

Exploration