ETV7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ETV7 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ETV7-associated genes across cancer lineages are ASB17, KLHL40, and C12orf40. Each is linked with ETV7 in more than 1 cancer types. Because this analysis shows association rather than direction, both ETV7-to-partner and partner-to-ETV7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASB17 grouped by ETV7-low versus ETV7-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ETV7→partner) and Y-score (partner→ETV7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYASB17 →+0.014+4.222<.001.00631
OVARYKLHL40 →+0.007+4.865.001<.00131
OVARYC12orf40 →+0.010+4.444<.001.00131
OVARYC1orf146 →+0.040+4.865<.001<.00131
LARGE_INTESTINESEPTIN14 →+0.009+3.684<.001.00631
LARGE_INTESTINEITGAD →+0.018+4.510<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

ASB17 by ETV7 expression — OVARY

Box plot of ASB17 in ETV7-low vs ETV7-high samples in OVARY.

Explore this box plot interactively →

Exploration