ETNK1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ETNK1 mutation is significantly associated with the RNA expression of many other genes, with 2,269 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ETNK1-associated genes across cancer lineages are OR5M6P, REXO1L8P, and MIR7976. Each is linked with ETNK1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ETNK1-to-partner and partner-to-ETNK1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR5M6P grouped by ETNK1-low versus ETNK1-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ETNK1→partner) and Y-score (partner→ETNK1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAOR5M6P →+0.272+5.378.008.00632
BRCAREXO1L8P →+0.062+6.950<.001<.00132
UCECMIR7976 →+0.241+1.737.005.00832
UCECHNRNPCL3 →+0.032+1.734<.001.00532
BRCANUP210P1 →+0.088+5.122<.001.00832
BLCASNORD116-3 →+0.261+3.266<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,269 associations by consensus.

OR5M6P by ETNK1 expression — BRCA

Box plot of OR5M6P in ETNK1-low vs ETNK1-high samples in BRCA.

Explore this box plot interactively →

Exploration