ERFE

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ERFE RNA expression is significantly associated with the go_rna of many other GO terms, with 3,766 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible ERFE-associated GO terms across cancer lineages are Positive regulation of telomerase RNA localization to Cajal body, Nucleic acid transport, and RNA transport. Each is linked with ERFE in more than 7 cancer types. Because this analysis shows association rather than direction, both ERFE-to-partner and partner-to-ERFE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of telomerase RNA localization to Cajal body grouped by ERFE-low versus ERFE-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ERFE→partner) and Y-score (partner→ERFE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSPositive regulation of telomerase RNA localization to Cajal body →+0.091+1.518.001<.00138
BONENucleic acid transport →+0.133+2.181<.001.00138
BONERNA transport →+0.133+2.181<.001.00138
BLOOD_MyelomaMitotic sister chromatid segregation →+0.075+0.724.001.00938
BLOOD_MyelomaSister chromatid segregation →+0.072+0.724.001.00938
LARGE_INTESTINEMitochondrion localization →+0.055+1.087<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,766 associations by consensus.

Positive regulation of telomerase RNA localization to Cajal body by ERFE expression — OESOPHAGUS

Box plot of Positive regulation of telomerase RNA localization to Cajal body in ERFE-low vs ERFE-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration