ERCC5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ERCC5 mutation is significantly associated with the RNA expression of many other genes, with 28 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ERCC5-associated genes across cancer lineages are OCSTAMP, OR5B12, and P2RY13. Each is linked with ERCC5 in more than 1 cancer types. Because this analysis shows association rather than direction, both ERCC5-to-partner and partner-to-ERCC5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OCSTAMP grouped by ERCC5-low versus ERCC5-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ERCC5→partner) and Y-score (partner→ERCC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSOCSTAMP →+0.008+3.449.001.00431
CNSOR5B12 →+0.011+4.459.001<.00131
CNSP2RY13 →+0.017+3.321<.001.00631
CNSPRAMEF20 →+0.215+3.459.003.00631
CNSCFAP97D2 →+0.037+3.730<.001.00231
LARGE_INTESTINEC2orf42 →+0.775+3.215<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

OCSTAMP by ERCC5 expression — CNS

Box plot of OCSTAMP in ERCC5-low vs ERCC5-high samples in CNS.

Explore this box plot interactively →

Exploration