EPHB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EPHB1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,090 significant associations in total. GBM shows the largest number of these associations.

The most reproducible EPHB1-associated genes across cancer lineages are KCNH1, RBPMS2P1, and RHEBP3. Each is linked with EPHB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both EPHB1-to-partner and partner-to-EPHB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EPHB1 versus KCNH1 in GBM, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EPHB1→partner) and Y-score (partner→EPHB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMKCNH1 →+0.756+0.508.001.00132
GBMRBPMS2P1 →+0.924+0.612<.001<.00132
GBMRHEBP3 →+0.886+0.607<.001<.00132
GBMRN7SKP244 →+0.486+0.402<.001<.00132
OVWWC1 →-1.724-2.620.001.00531
OVB4GALT2 →+1.019+2.620<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,090 associations by consensus.

EPHB1 vs KCNH1 — GBM

Per-sample scatter of EPHB1 vs KCNH1 in GBM (Pearson r = 0.35).

Explore this scatter interactively →

Exploration