EPB41L3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EPB41L3 mutation is significantly associated with the RNA expression of many other genes, with 6,928 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EPB41L3-associated genes across cancer lineages are LDHA, PTP4A3, and UTP18. Each is linked with EPB41L3 in more than 4 cancer types. Because this analysis shows association rather than direction, both EPB41L3-to-partner and partner-to-EPB41L3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LDHA grouped by EPB41L3-low versus EPB41L3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EPB41L3→partner) and Y-score (partner→EPB41L3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLDHA →+0.476+1.807<.001<.00135
COADPTP4A3 →-0.862-3.989.001<.00135
UCECUTP18 →+0.385+1.378.001<.00134
COADPLA2G4A →+1.054+2.087.003.00534
UCECCYYR1 →-0.405-1.530.004.00334
COADTLCD3A →+0.562+2.916<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,928 associations by consensus.

LDHA by EPB41L3 expression — UCEC

Box plot of LDHA in EPB41L3-low vs EPB41L3-high samples in UCEC.

Explore this box plot interactively →

Exploration