ELP4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ELP4 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ELP4-associated genes across cancer lineages are Src_pY416, YB-1, and c-Jun_pS73. Each is linked with ELP4 in more than 1 cancer types. Because this analysis shows association rather than direction, both ELP4-to-partner and partner-to-ELP4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Src_pY416 grouped by ELP4-low versus ELP4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ELP4→partner) and Y-score (partner→ELP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSrc_pY416 →-0.256-3.308.042.01031
UCECYB-1 →+0.180+3.000.030.03631
UCECc-Jun_pS73 →-0.184-3.160.027.01931
UCECJNK2 →+0.276+3.321.007.01021
UCECPDK1_pS241 →+0.238+2.183.008.03511
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

Src_pY416 by ELP4 expression — UCEC

Box plot of Src_pY416 in ELP4-low vs ELP4-high samples in UCEC.

Explore this box plot interactively →

Exploration