EFHC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFHC1 protein abundance is significantly associated with the RNA expression of many other genes, with 10,794 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible EFHC1-associated genes across cancer lineages are SPEF1, TSNAXIP1, and CCDC113. Each is linked with EFHC1 in more than 3 cancer types. Because this analysis shows association rather than direction, both EFHC1-to-partner and partner-to-EFHC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EFHC1 versus SPEF1 in UCEC, with a Pearson correlation of 0.65.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFHC1→partner) and Y-score (partner→EFHC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSPEF1 →+1.825+0.509<.001<.00134
UCECTSNAXIP1 →+1.433+0.558<.001<.00134
UCECCCDC113 →+1.357+0.697<.001<.00134
UCECCFAP69 →+0.939+0.945<.001<.00134
UCECNME5 →+1.044+0.576<.001<.00134
UCECCFAP94 →+1.361+0.728<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,794 associations by consensus.

EFHC1 vs SPEF1 — UCEC

Per-sample scatter of EFHC1 vs SPEF1 in UCEC (Pearson r = 0.65).

Explore this scatter interactively →

Exploration