EDRF1-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, EDRF1-DT RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of EDRF1-DT’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where EDRF1-DT RNA is repressed in tumor relative to normal tissue. In most cancer types EDRF1-DT is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KICH, THCA, and KIRC are the cancer types where EDRF1-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in EDRF1-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleAll−1.155<.00111view →
THCAMaleAll−0.645<.00111view →
KIRCMaleII,III,IV−0.337<.00110view →
KIRPAllAll−0.475<.0017view →
HNSCMaleII,III,IV−0.237<.0016view →
LUADAllAll+0.157.0083view →
PRADAllAll+0.294<.0012view →
CHOLAllAll+0.543.0211view →
BLCAMaleIII,IV−0.275.0291view →
LUSCAllIII,IV−0.225.0381view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration