DUSP6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DUSP6 protein abundance is significantly associated with the RNA expression of many other genes, with 4,066 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible DUSP6-associated genes across cancer lineages are ATG4A, PPBP, and GGCT. Each is linked with DUSP6 in more than 1 cancer types. Because this analysis shows association rather than direction, both DUSP6-to-partner and partner-to-DUSP6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DUSP6 versus ATG4A in GBM, with a Pearson correlation of 0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DUSP6→partner) and Y-score (partner→DUSP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMATG4A →+0.347+0.539.006.00232
GBMPPBP →+1.000+0.538.002<.00132
LUADGGCT →+0.592+0.553.004<.00132
BRCARPIA →-0.484-0.450<.001.00132
BRCATDRD5 →-1.944-0.603<.001<.00132
HNSCGDA →-1.842-0.679.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,066 associations by consensus.

DUSP6 vs ATG4A — GBM

Per-sample scatter of DUSP6 vs ATG4A in GBM (Pearson r = 0.36).

Explore this scatter interactively →

Exploration