DTX4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DTX4 mutation is significantly associated with the RNA expression of many other genes, with 3,870 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DTX4-associated genes across cancer lineages are RNA5SP413, CTAG1B, and SNORD114-10. Each is linked with DTX4 in more than 2 cancer types. Because this analysis shows association rather than direction, both DTX4-to-partner and partner-to-DTX4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP413 grouped by DTX4-low versus DTX4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DTX4→partner) and Y-score (partner→DTX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP413 →+0.797+1.914<.001<.00133
HNSCCTAG1B →+0.073+6.111<.001.00232
HNSCSNORD114-10 →+0.887+5.303<.001.00632
HNSCSNORD31B →+0.572+7.357<.001<.00132
CESCRN7SKP258 →+0.093+4.144<.001.00932
BRCAATP6V1G1P3 →+0.306+4.030<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,870 associations by consensus.

RNA5SP413 by DTX4 expression — UCEC

Box plot of RNA5SP413 in DTX4-low vs DTX4-high samples in UCEC.

Explore this box plot interactively →

Exploration