DSG2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DSG2 protein abundance is significantly associated with the RNA expression of many other genes, with 16,712 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DSG2-associated genes across cancer lineages are DSG2-AS1, MFNG, and PIK3CG. Each is linked with DSG2 in more than 7 cancer types. Because this analysis shows association rather than direction, both DSG2-to-partner and partner-to-DSG2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DSG2 versus DSG2-AS1 in LSCC, with a Pearson correlation of 0.75.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DSG2→partner) and Y-score (partner→DSG2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDSG2-AS1 →+0.787+0.669<.001<.00138
OVMFNG →-0.910-0.604.001<.00137
OVPIK3CG →-1.073-0.745<.001<.00137
OVBTK →-1.092-0.556<.001<.00137
LSCCSLAMF1 →-0.662-0.454<.001<.00137
OVMAN1C1 →-0.890-0.637<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,712 associations by consensus.

DSG2 vs DSG2-AS1 — LSCC

Per-sample scatter of DSG2 vs DSG2-AS1 in LSCC (Pearson r = 0.75).

Explore this scatter interactively →

Exploration