DSG1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, DSG1-AS1 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of DSG1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where DSG1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types DSG1-AS1 is over-expressed in tumor, although a few such as HNSC show the opposite, repressed pattern.

HNSC, LUSC, and BLCA are the cancer types where DSG1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in DSG1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCAllII,III,IV−1.227<.00110view →
LUSCFemaleII,III,IV+2.527<.0017view →
BLCAAllIV+1.097.0054view →
COADAllAll+0.258.0024view →
BRCAAllII,III,IV+0.113.0273view →
LUADAllAll+0.119.0132view →
LIHCAllAll+0.037.0362view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

DSG1-AS1–HNSC

Tumor-vs-normal expression box plot for DSG1-AS1 RNA in HNSC.

Open the HNSC breakdown →

Exploration