DSEL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DSEL protein abundance is significantly associated with the RNA expression of many other genes, with 138 significant associations in total. GBM shows the largest number of these associations.

The most reproducible DSEL-associated genes across cancer lineages are MEFV, STAG3L4, and SUDS3. Each is linked with DSEL in more than 1 cancer types. Because this analysis shows association rather than direction, both DSEL-to-partner and partner-to-DSEL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DSEL versus MEFV in GBM, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DSEL→partner) and Y-score (partner→DSEL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMEFV →+0.691+0.354.005.00331
GBMSTAG3L4 →-0.623-0.326.002.00631
GBMSUDS3 →-0.547-0.408.004.00131
GBMCD274 →+0.860+0.350.007.00431
GBMKBTBD7 →-0.615-0.520<.001.00131
GBMKIRREL2 →+1.317+0.277<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 138 associations by consensus.

DSEL vs MEFV — GBM

Per-sample scatter of DSEL vs MEFV in GBM (Pearson r = 0.62).

Explore this scatter interactively →

Exploration