DSEL

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DSEL RNA expression is significantly associated with the go_rna of many other GO terms, with 3,261 significant associations in total. CNS shows the largest number of these associations.

The most reproducible DSEL-associated GO terms across cancer lineages are Endoplasmic reticulum to Golgi vesicle-mediated transport, Indole-containing compound metabolic process, and Relaxation of smooth muscle. Each is linked with DSEL in more than 9 cancer types. Because this analysis shows association rather than direction, both DSEL-to-partner and partner-to-DSEL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoplasmic reticulum to Golgi vesicle-mediated transport grouped by DSEL-low versus DSEL-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DSEL→partner) and Y-score (partner→DSEL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEEndoplasmic reticulum to Golgi vesicle-mediated transport →+0.074+1.744<.001<.001310
SOFT_TISSUEIndole-containing compound metabolic process →-0.133-1.460<.001.00239
OESOPHAGUSRelaxation of smooth muscle →-0.231-0.907<.001.00138
STOMACHNuclear envelope organization →+0.100+1.741<.001.00629
UPPER_AERODIGESTIVE_TRACTSerotonin secretion →-1.214-0.910.005.00129
UPPER_AERODIGESTIVE_TRACTSerotonin production involved in inflammatory response →-1.214-0.910.005.00129
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,261 associations by consensus.

Endoplasmic reticulum to Golgi vesicle-mediated transport by DSEL expression — SOFT_TISSUE

Box plot of Endoplasmic reticulum to Golgi vesicle-mediated transport in DSEL-low vs DSEL-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration