DOK4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DOK4 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible DOK4-associated genes across cancer lineages are C1orf146, OR10R2, and NLRP2B. Each is linked with DOK4 in more than 1 cancer types. Because this analysis shows association rather than direction, both DOK4-to-partner and partner-to-DOK4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C1orf146 grouped by DOK4-low versus DOK4-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DOK4→partner) and Y-score (partner→DOK4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYC1orf146 →+0.040+4.450<.001.00431
LARGE_INTESTINEOR10R2 →+0.031+4.977<.001.00731
OVARYNLRP2B →+0.059+4.392<.001.00411
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

C1orf146 by DOK4 expression — OVARY

Box plot of C1orf146 in DOK4-low vs DOK4-high samples in OVARY.

Explore this box plot interactively →

Exploration