DNMT3B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DNMT3B protein abundance is significantly associated with the RNA expression of many other genes, with 2,248 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DNMT3B-associated genes across cancer lineages are DSCC1, KIF15, and CDC25A. Each is linked with DNMT3B in more than 2 cancer types. Because this analysis shows association rather than direction, both DNMT3B-to-partner and partner-to-DNMT3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DNMT3B versus DSCC1 in BRCA, with a Pearson correlation of 0.74.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DNMT3B→partner) and Y-score (partner→DNMT3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCADSCC1 →+1.251+0.935.001.00433
UCECKIF15 →+1.323+0.477<.001<.00133
UCECCDC25A →+1.144+0.514<.001<.00133
UCECCDKN3 →+1.004+0.615<.001<.00132
LSCCVRK1 →+0.838+1.149.003<.00132
UCECGINS1 →+1.021+0.598<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,248 associations by consensus.

DNMT3B vs DSCC1 — BRCA

Per-sample scatter of DNMT3B vs DSCC1 in BRCA (Pearson r = 0.74).

Explore this scatter interactively →

Exploration