DMD

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DMD mutation is significantly associated with the RNA expression of many other genes, with 7,383 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DMD-associated genes across cancer lineages are NCAPG, ARHGEF39, and CA5BP1. Each is linked with DMD in more than 6 cancer types. Because this analysis shows association rather than direction, both DMD-to-partner and partner-to-DMD results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DMD→partner) and Y-score (partner→DMD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADNCAPG →+0.647+3.338<.001<.00137
BRCAARHGEF39 →+0.349+1.654.004.00237
BRCACA5BP1 →+0.326+1.425.001.00737
STADERCC6L →+0.509+2.103<.001<.00137
STADTYMS →+0.533+1.891<.001<.00137
BRCACCL14 →-0.497-2.584.003.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,383 associations by consensus.

Exploration