DGKD

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DGKD mutation is significantly associated with the RNA expression of many other genes, with 5,000 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DGKD-associated genes across cancer lineages are DLGAP5, RFWD3, and EXO1. Each is linked with DGKD in more than 3 cancer types. Because this analysis shows association rather than direction, both DGKD-to-partner and partner-to-DGKD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DLGAP5 grouped by DGKD-low versus DGKD-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DGKD→partner) and Y-score (partner→DGKD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDLGAP5 →+0.493+1.483.007.00734
UCECRFWD3 →+0.519+2.078<.001<.00133
COADEXO1 →+0.850+3.820<.001<.00124
SKCMRNA5SP477 →+0.521+2.488.001.00333
UCECMIEF1 →+0.360+1.852<.001<.00133
SKCMPOLE2 →+0.622+2.353<.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,000 associations by consensus.

DLGAP5 by DGKD expression — UCEC

Box plot of DLGAP5 in DGKD-low vs DGKD-high samples in UCEC.

Explore this box plot interactively →

Exploration